Mercurial > repos > thomaswollmann > binary2labelimage
comparison binary2label.xml @ 0:4f07ac917459 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/\binary2labelimage commit 77f1ea5beca40d8b5851fe366e84c32d5df5d6f8
| author | thomaswollmann |
|---|---|
| date | Sat, 11 Feb 2017 17:28:38 -0500 |
| parents | |
| children | 94566c0758fa |
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| -1:000000000000 | 0:4f07ac917459 |
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| 1 <tool id="binary2labelimage" name="Binary 2 Label" version="0.1"> | |
| 2 <description>Converts Binary to Label Image</description> | |
| 3 <requirements> | |
| 4 <requirement type="package" version="0.12.3" >scikit-image</requirement> | |
| 5 <requirement type="package" version="4.0.0">pillow</requirement> | |
| 6 <requirement type="package" version="1.12">numpy</requirement> | |
| 7 </requirements> | |
| 8 <command> | |
| 9 <![CDATA[ | |
| 10 python "$__tool_directory__/binary2label.py" '$input' '$output' | |
| 11 ]]> | |
| 12 </command> | |
| 13 <inputs> | |
| 14 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Binary Image File"/> | |
| 15 </inputs> | |
| 16 <outputs> | |
| 17 <data format="tiff" name="output"/> | |
| 18 </outputs> | |
| 19 <tests> | |
| 20 <test> | |
| 21 <param name="input" value="galaxyIcon_noText.tif" /> | |
| 22 <output name="output" value="label.tif" ftype="tiff" /> | |
| 23 </test> | |
| 24 </tests> | |
| 25 <help>This tool assigns every object an own grey value.</help> | |
| 26 <citations> | |
| 27 <citation type="doi">10.7717/peerj.453</citation> | |
| 28 </citations> | |
| 29 </tool> |
