comparison macros.xml @ 0:f9c1aaf4f592 draft

planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty

0:f9c1aaf4f592

<macros>
    <token name="@VERSION@">2.0.20181010</token>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@VERSION@">nullarbor</requirement>
            <!-- <container type="docker">quay.io/thanhleviet/nullarbor</container> -->
        </requirements>
    </xml>

    <xml name="version_command">
        <version_command>nullarbor.pl --version</version_command>
    </xml>
    
    <xml name="env">
    <environment_variables>
        <environment_variable name="KRAKEN_DEFAULT_DB">${GALAXY_DATA_MANAGER_DATA_PATH}/taxonomy/minikraken_20171013_4GB</environment_variable>
        <environment_variable name="CENTRIFUGE_DEFAULT_DB">${GALAXY_DATA_MANAGER_DATA_PATH}/taxonomy/p_compressed+h+v</environment_variable>
    </environment_variables>
    </xml>
    <!-- <xml name="citations">
        <citations>
            <citation type="doi">fill_here</citation>
        </citations>
    </xml> -->
</macros>