Mercurial > repos > thanhlv > nullarbor
annotate macros.xml @ 3:63ba2e9353bb draft default tip
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
| author | thanhlv |
|---|---|
| date | Mon, 06 May 2019 08:05:32 -0400 |
| parents | f9c1aaf4f592 |
| children |
| rev | line source |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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1 <macros> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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2 <token name="@VERSION@">2.0.20181010</token> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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3 <xml name="requirements"> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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4 <requirements> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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5 <requirement type="package" version="@VERSION@">nullarbor</requirement> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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6 <!-- <container type="docker">quay.io/thanhleviet/nullarbor</container> --> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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7 </requirements> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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8 </xml> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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9 |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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10 <xml name="version_command"> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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11 <version_command>nullarbor.pl --version</version_command> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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12 </xml> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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13 |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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14 <xml name="env"> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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15 <environment_variables> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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16 <environment_variable name="KRAKEN_DEFAULT_DB">${GALAXY_DATA_MANAGER_DATA_PATH}/taxonomy/minikraken_20171013_4GB</environment_variable> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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17 <environment_variable name="CENTRIFUGE_DEFAULT_DB">${GALAXY_DATA_MANAGER_DATA_PATH}/taxonomy/p_compressed+h+v</environment_variable> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
|
18 </environment_variables> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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19 </xml> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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20 <!-- <xml name="citations"> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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21 <citations> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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22 <citation type="doi">fill_here</citation> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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23 </citations> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
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24 </xml> --> |
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f9c1aaf4f592
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/nullarbor commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
thanhlv
parents:
diff
changeset
|
25 </macros> |
