Mercurial > repos > thanhlv > kaptive
comparison kaptive.xml @ 3:33ca42aba93a draft default tip
"planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/kaptive commit f07ab842192ee3d9d1cc46c1de3c542213152a31-dirty"
| author | thanhlv |
|---|---|
| date | Tue, 19 Oct 2021 09:32:23 +0000 |
| parents | 62f30507967c |
| children |
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| 2:62f30507967c | 3:33ca42aba93a |
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| 35 > $output | 35 > $output |
| 36 ]]> </command> | 36 ]]> </command> |
| 37 | 37 |
| 38 <inputs> | 38 <inputs> |
| 39 <param name="assemblies" type="data" format="fasta" multiple="true" label="Assembly"/> | 39 <param name="assemblies" type="data" format="fasta" multiple="true" label="Assembly"/> |
| 40 <param name="ref" type="data" format="genbank" multiple="true" label="Reference" help="Genbank format"/> | 40 <param name="ref" type="data" format="genbank" label="Reference" help="Genbank format"/> |
| 41 <param name="allelic_typing" type="data" format="fasta" optional="true" label="Allelic Typing input" help="Optional"/> | 41 <param name="allelic_typing" type="data" format="fasta" optional="true" label="Allelic Typing input" help="Optional"/> |
| 42 <param argument="--verbose" type="boolean" truevalue="--verbose" falsevalue="" checked="True" label="Suppress output files of sequences matching locus" /> | 42 <param argument="--verbose" type="boolean" truevalue="--verbose" falsevalue="" checked="True" label="Suppress output files of sequences matching locus" /> |
| 43 <param argument="--no_seq_out" type="boolean" truevalue="--no_seq_out" falsevalue="" checked="False" label="Suppress output files of sequences matching locus" /> | 43 <param argument="--no_seq_out" type="boolean" truevalue="--no_seq_out" falsevalue="" checked="False" label="Suppress output files of sequences matching locus" /> |
| 44 <param argument="--no_json" type="boolean" truevalue="--no_json" falsevalue="" checked="True" label="Suppress output of JSON file" /> | 44 <param argument="--no_json" type="boolean" truevalue="--no_json" falsevalue="" checked="True" label="Suppress output of JSON file" /> |
| 45 <param argument="--start_end_margin" type="integer" value="10" label="Missing bases at the ends of locus allowed in a perfect match" /> | 45 <param argument="--start_end_margin" type="integer" value="10" label="Missing bases at the ends of locus allowed in a perfect match" /> |