diff flye.xml @ 2:e57e2c2952ff draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/flye commit 0b1a602e21fbf8cfeba1294b6b985f1fba75afe9-dirty

--- a/flye.xml	Thu Apr 04 11:45:42 2019 -0400
+++ b/flye.xml	Thu Apr 04 11:48:36 2019 -0400
@@ -44,8 +44,8 @@
     #if $meta:
         '$meta'
     #end if
-    #if $no-trestle:
-        '$no-trestle'
+    #if $no_trestle:
+        '$no_trestle'
     #end if
     2>&1
     ]]></command>
@@ -66,7 +66,7 @@
         <param argument="--asm_coverage" type="integer" optional="true" label="reduced coverage for initial contig assembly (default: not set)" />
         <param argument="--plasmid" type="boolean" truevalue="--plasmid" falsevalue="" checked="False" label="rescue short unassmebled plasmids" />
         <param argument="--meta" type="boolean" truevalue="--meta" falsevalue="" checked="False" label="metagenome / uneven coverage mode" />
-        <param argument="--no-trestle" type="boolean" truevalue="--no-trestle" falsevalue="" checked="False" label="skip Trestle stage" />
+        <param argument="--no_trestle" type="boolean" truevalue="--no-trestle" falsevalue="" checked="False" label="skip Trestle stage" />
     </inputs>
     <outputs>
         <data name="scaffolds" format="fasta" from_work_dir="out_dir/scaffolds.fasta" label="${tool.name} on ${on_string} (scaffolds)"/>