view planemo_command/planemo_command_ariba.sh @ 3:6aabe4f367fd draft

planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/ariba commit 067b5a6a02d5f04c2155b45eed5df257a1360645-dirty

#!/usr/bin/env bash
planemo tool_init \
        --force \
        --id "ariba_run" \
        --name "Antimicrobial Resistance Identification By Assembly" \
        --requirement ariba@2.13.1 \
        --example_command 'ariba run $DBNAME reads1.fastq reads2.fastq out.run' \
        --example_input 2.fastq \
        --example_output out.run \
        --cite_url 'https://github.com/sanger-pathogens/ariba'