Mercurial > repos > test-svm > kmersvm_test

comparison kmersvm/scripts/split_genome.py @ 11:3b0c30b3baf1 draft default tip

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author test-svm
date Wed, 08 Aug 2012 19:20:14 -0400
parents f99b5099ea55
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10:83346c563dcb 11:3b0c30b3baf1
42 default=500, help="set overlap size") 42 default=500, help="set overlap size")
43 parser.add_option("-o", dest="output", default="split_genome_output.bed", \ 43 parser.add_option("-o", dest="output", default="split_genome_output.bed", \
44 help="output BED file (default is split_genome_output.bed)") 44 help="output BED file (default is split_genome_output.bed)")
45 45
46 (options, args) = parser.parse_args() 46 (options, args) = parser.parse_args()
47 if len(args) == 0:
48 parser.print_help()
49 sys.exit(0)
47 50
48 bed_file = args[0] 51 bed_file = args[0]
49 52
50 split(bed_file, options) 53 split(bed_file, options)
51 54