Mercurial > repos > tduigou > seq_from_db
diff output.json @ 2:3bb9bbecae97 draft default tip
planemo upload for repository https://github.com/brsynth/galaxytools/tree/main/tools commit 767392e3136912fa30d1e0786eba789dd77d722c-dirty
| author | tduigou |
|---|---|
| date | Wed, 03 Sep 2025 14:07:14 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/output.json Wed Sep 03 14:07:14 2025 +0000 @@ -0,0 +1,604 @@ +{ + "summary": { + "num_errors": 0, + "num_failures": 0, + "num_skips": 0, + "num_tests": 3 + }, + "tests": [ + { + "data": { + "inputs": { + "input": { + "id": "4a322b718ac1c0e2", + "src": "hda" + }, + "json_use|annotation_columns": "annotation", + "json_use|db_uri": "postgresql://postgres:RK17@localhost:5432/test_fragments_db", + "json_use|fragment_column": "fragment", + "json_use|sequence_column": "sequence", + "json_use|table": "sample", + "json_use|use_json_paramers": false + }, + "job": { + "command_line": "mkdir 'outdir' && python '/home/rkhaled/galaxytools/tools/seq_from_db/get_db_info.py' --input '/tmp/tmpk1dzvi78/files/c/1/9/dataset_c19fee65-2ddf-471a-97f2-745ff33b2e2b.dat' --use_json_paramers 'false' --sequence_column 'sequence' --annotation_columns 'annotation' --db_uri 'postgresql://postgres:RK17__at__localhost:5432/test_fragments_db' --table 'sample' 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