Mercurial > repos > tduigou > parameters_maystro
diff test-data/test_json.json @ 1:34135dac85b0 draft default tip
planemo upload for repository https://github.com/brsynth commit d8cc8b87fdb0374745b5420f2da7f08ae905c222-dirty
| author | tduigou |
|---|---|
| date | Wed, 16 Jul 2025 14:28:21 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_json.json Wed Jul 16 14:28:21 2025 +0000 @@ -0,0 +1,12 @@ +{ + "avoid_patterns": "BsaI_site\nBsmBI_site\nBbsI_site\nSapI_site\n8x1mer\n5x3mer\n9x2mer", + "hairpin_constraints": "stem_size=20, hairpin_window=200", + "gc_constraints": "mini=0.3, maxi=0.7, window=100\nmini=0.1, maxi=0.9, window=100", + "kmer_size": "15", + "execution": "true", + "db_uri": "postgresql://postgres:RK17@localhost:5432/test_fragments_db", + "table": "sample", + "fragment_column": "fragment", + "sequence_column": "sequence", + "annotation_column": "annotation" +} \ No newline at end of file
