diff test-data/BASIC_assembly_dataset/RFP.gb @ 0:dc450979fcd4 draft

planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/DnaCauldron/tree/master commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/BASIC_assembly_dataset/RFP.gb	Fri May 16 09:39:03 2025 +0000
@@ -0,0 +1,136 @@
+LOCUS       RFP                     3723 bp    DNA     circular UNK 01-JAN-1980
+DEFINITION  
+ACCESSION   
+VERSION     
+SOURCE      
+  ORGANISM  
+COMMENT     Serial Cloner Genbank Format
+COMMENT     SerialCloner_Type=DNA
+COMMENT     SerialCloner_Comments=seq verified 20140514
+COMMENT     SerialCloner_Ends=0,0,,0,
+FEATURES             Location/Qualifiers
+     primer_bind     complement(796..815)
+                     /label=T7
+                     /SerialCloner_Color=&h008B8B
+                     /SerialCloner_Show=True
+                     /SerialCloner_Protect=False
+                     /SerialCloner_Arrow=True
+     rep_origin      2321..2949
+                     /label=ColE1 origin
+                     /SerialCloner_Color=&h4682B4
+                     /SerialCloner_Show=True
+                     /SerialCloner_Protect=False
+                     /SerialCloner_Arrow=True
+     misc_binding    3292..3314
+                     /label=LacO
+                     /SerialCloner_Color=&h6495ED
+                     /SerialCloner_Show=True
+                     /SerialCloner_Protect=False
+                     /SerialCloner_Arrow=True
+     CDS             1510..2169
+                     /label=AmpR
+                     /SerialCloner_Color=&h8FBC8F
+                     /SerialCloner_Show=True
+                     /SerialCloner_Protect=False
+                     /SerialCloner_Arrow=True
+     Promoter        1242..1270
+                     /label=Amp prom
+                     /SerialCloner_Color=&h4682B4
+                     /SerialCloner_Show=True
+                     /SerialCloner_Protect=False
+                     /SerialCloner_Arrow=True
+     misc_feature    complement(799..815)
+                     /label=T7-promoter
+                     /SerialCloner_Color=&hFF00FF
+                     /SerialCloner_Show=True
+                     /SerialCloner_Protect=False
+                     /SerialCloner_Arrow=True
+     misc_feature    19..726
+                     /label=mcherry
+                     /SerialCloner_Color=&hFF0080
+                     /SerialCloner_Show=True
+                     /SerialCloner_Protect=False
+                     /SerialCloner_Arrow=True
+     misc_feature    1..18
+                     /label=Prefix
+                     /SerialCloner_Color=&hFF0080
+                     /SerialCloner_Show=True
+                     /SerialCloner_Protect=False
+                     /SerialCloner_Arrow=True
+     misc_feature    730..747
+                     /label=Suffix
+                     /SerialCloner_Color=&hFF00FF
+                     /SerialCloner_Show=True
+                     /SerialCloner_Protect=False
+                     /SerialCloner_Arrow=True
+     misc_feature    complement(1313..1509)
+                     /label=pB1a promoter
+                     /SerialCloner_Color=&h84A4C0
+                     /SerialCloner_Show=True
+                     /SerialCloner_Protect=False
+                     /SerialCloner_Arrow=True
+ORIGIN
+        1 TCTGGTGGGT CTCTGTCCAT GGTGAGCAAG GGCGAGGAGG ATAACATGGC CATCATCAAG 
+       61 GAGTTCATGC GCTTCAAGGT GCACATGGAG GGCTCCGTGA ACGGCCACGA GTTCGAGATC 
+      121 GAGGGCGAGG GCGAGGGCCG CCCCTACGAG GGCACCCAGA CCGCCAAGCT GAAGGTGACC 
+      181 AAGGGTGGCC CCCTGCCCTT CGCCTGGGAC ATCCTGTCCC CTCAGTTCAT GTACGGCTCC 
+      241 AAGGCCTACG TGAAGCACCC CGCCGACATC CCCGACTACT TGAAGCTGTC CTTCCCCGAG 
+      301 GGCTTCAAGT GGGAGCGCGT GATGAACTTC GAGGACGGCG GCGTGGTGAC CGTGACCCAG 
+      361 GACTCCTCCT TGCAGGACGG CGAGTTCATC TACAAGGTGA AGCTGCGCGG CACCAACTTC 
+      421 CCCTCCGACG GCCCCGTAAT GCAGAAGAAG ACCATGGGCT GGGAGGCCTC CTCCGAGCGG 
+      481 ATGTACCCCG AGGACGGCGC CCTGAAGGGC GAGATCAAGC AGAGGCTGAA GCTGAAGGAC 
+      541 GGCGGCCACT ACGACGCTGA GGTCAAGACC ACCTACAAGG CCAAGAAGCC CGTGCAGCTG 
+      601 CCCGGCGCCT ACAACGTCAA CATCAAGTTG GACATCACCT CCCACAACGA GGACTACACC 
+      661 ATCGTGGAAC AGTACGAACG CGCCGAGGGC CGCCACTCCA CCGGCGGCAT GGACGAGCTG 
+      721 TACAAGTAAG GCTCGGGAGA CCTATCGTAT CTTGCTGAAA AACTCGAGCC ATCCGGAAGA 
+      781 TCTGGCGGCC GCTCTCCCTA TAGTGAGTCG TATTACGCCG GATGGATATG GTGTTCAGGC 
+      841 ACAAGTGTTA AAGCAGTTGA TTTTATTCAC TATGATGAAA AAAACAATGA ATGGAACCTG 
+      901 CTCCAAGTTA AAAATAGAGA TAATACCGAA AACTCATCGA GTAGTAAGAT TAGAGATAAT 
+      961 ACAACAATAA AAAAATGGTT TAGAACTTAC TCACAGCGTG ATGCTACTAA TTGGGACAAT 
+     1021 TTTCCAGATG AAGTATCATC TAAGAATTTA AATGAAGAAG ACTTCAGAGC TTTTGTTAAA 
+     1081 AATTATTTGG CAAAAATAAT ATAATTCGGC TGCAGGGGCG GCCTCGTGAT ACGCCTATTT 
+     1141 TTATAGGTTA ATGTCATGAT AATAATGGTT TCTTAGACGT CAGGTGGCAC TTTTCGGGGA 
+     1201 AATGTGCGCG GAACCCCTAT TTGTTTATTT TTCTAAATAC ATTCAAATAT GTATCCGCTC 
+     1261 ATGAGACAAT AACCCTGATA AATGCTTCAA TAATATTGAA AAAGGAAGAG TATGAGTATT 
+     1321 CAACATTTCC GTGTCGCCCT TATTCCCTTT TTTGCGGCAT TTTGCCTTCC TGTTTTTGCT 
+     1381 CACCCAGAAA CGCTGGTGAA AGTAAAAGAT GCTGAAGATC AGTTGGGTGC ACGAGTGGGT 
+     1441 TACATCGAAC TGGATCTCAA CAGCGGTAAG ATCCTTGAGA GTTTTCGCCC CGAAGAACGT 
+     1501 TTTCCAATGA TGAGCACTTT TAAAGTTCTG CTATGTGGCG CGGTATTATC CCGTATTGAC 
+     1561 GCCGGGCAAG AGCAACTCGG TCGCCGCATA CACTATTCTC AGAATGACTT GGTTGAGTAC 
+     1621 TCACCAGTCA CAGAAAAGCA TCTTACGGAT GGCATGACAG TAAGAGAATT ATGCAGTGCT 
+     1681 GCCATAACCA TGAGTGATAA CACTGCGGCC AACTTACTTC TGACAACGAT CGGAGGACCG 
+     1741 AAGGAGCTAA CCGCTTTTTT GCACAACATG GGGGATCATG TAACTCGCCT TGATCGTTGG 
+     1801 GAACCGGAGC TGAATGAAGC CATACCAAAC GACGAGCGTG ACACCACGAT GCCTGTAGCA 
+     1861 ATGGCAACAA CGTTGCGCAA ACTATTAACT GGCGAACTAC TTACTCTAGC TTCCCGGCAA 
+     1921 CAATTAATAG ACTGGATGGA GGCGGATAAA GTTGCAGGAC CACTTCTGCG CTCGGCCCTT 
+     1981 CCGGCTGGCT GGTTTATTGC TGATAAATCT GGAGCCGGTG AGCGTGGGTC TCGCGGTATC 
+     2041 ATTGCAGCAC TGGGGCCAGA TGGTAAGCCC TCCCGTATCG TAGTTATCTA CACGACGGGG 
+     2101 AGTCAGGCAA CTATGGATGA ACGAAATAGA CAGATCGCTG AGATAGGTGC CTCACTGATT 
+     2161 AAGCATTGGT AACTGTCAGA CCAAGTTTAC TCATATATAC TTTAGATTGA TTTAAAACTT 
+     2221 CATTTTTAAT TTAAAAGGAT CTAGGTGAAG ATCCTTTTTG ATAATCTCAT GACCAAAATC 
+     2281 CCTTAACGTG AGTTTTCGTT CCACTGAGCG TCAGACCCCG TAGAAAAGAT CAAAGGATCT 
+     2341 TCTTGAGATC CTTTTTTTCT GCGCGTAATC TGCTGCTTGC AAACAAAAAA ACCACCGCTA 
+     2401 CCAGCGGTGG TTTGTTTGCC GGATCAAGAG CTACCAACTC TTTTTCCGAA GGTAACTGGC 
+     2461 TTCAGCAGAG CGCAGATACC AAATACTGTC CTTCTAGTGT AGCCGTAGTT AGGCCACCAC 
+     2521 TTCAAGAACT CTGTAGCACC GCCTACATAC CTCGCTCTGC TAATCCTGTT ACCAGTGGCT 
+     2581 GCTGCCAGTG GCGATAAGTC GTGTCTTACC GGGTTGGACT CAAGACGATA GTTACCGGAT 
+     2641 AAGGCGCAGC GGTCGGGCTG AACGGGGGGT TCGTGCACAC AGCCCAGCTT GGAGCGAACG 
+     2701 ACCTACACCG AACTGAGATA CCTACAGCGT GAGCTATGAG AAAGCGCCAC GCTTCCCGAA 
+     2761 GGGAGAAAGG CGGACAGGTA TCCGGTAAGC GGCAGGGTCG GAACAGGAGA GCGCACGAGG 
+     2821 GAGCTTCCAG GGGGAAACGC CTGGTATCTT TATAGTCCTG TCGGGTTTCG CCACCTCTGA 
+     2881 CTTGAGCGTC GATTTTTGTG ATGCTCGTCA GGGGGGCGGA GCCTATGGAA AAACGCCAGC 
+     2941 AACGCGGCCT TTTTACGGTT CCTGGCCTTT TGCTGGCCTT TTGCTCACAT GTTCTTTCCT 
+     3001 GCGTTATCCC CTGATTCTGT GGATAACCGT ATTACCGCCT TTGAGTGAGC TGATACCGCT 
+     3061 CGCCGCAGCC GAACGACCGA GCGCAGCGAG TCAGTGAGCG AGGAAGCGGA AGAGCGCCCA 
+     3121 ATACGCAAAC CGCCTCTCCC CGCGCGTTGG CCGATTCATT AATGCAGCTG GCACGACAGG 
+     3181 TTTCCCGACT GGAAAGCAAT TGGCAGTGAG CGCAACGCAA TTAATGTGAG TTAGCTCACT 
+     3241 CATTAGGCAC CCCAGGCTTT ACACTTTATG CTTCCGGCTC GTATAATGTG TGGAATTGTG 
+     3301 AGCGGATAAC AATTTCACAC AGGAGGTTTA AACTTTAAAC ATGTCAAAAG AGACGTCTTT 
+     3361 TGTTAAGAAT GCTGAGGAAC TTGCAAAGCA AAAAATGGAT GCTATTAACC CTGAACTTTC 
+     3421 TTCAAAATTT AAATTTTTAA TAAAATTCCT GTCTCAGTTT CCTGAAGCTT GCTCTAAACC 
+     3481 TCGTTCAAAA AAAATGCAGA ATAAAGTTGG TCAAGAGGAA CATATTGAAT ATTTAGCTCG 
+     3541 TAGTTTTCAT GAGAGTCGAT TGCCAAGAAA ACCCACGCCA CCTACAACGG TTCCTGATGA 
+     3601 GGTGGTTAGC ATAGTTCTTA ATATAAGTTT TAATATACAG CCTGAAAATC TTGAGAGAAT 
+     3661 AAAAGAAGAA CATCGATTTT CCATGGCAGC TGAGAATATT GTAGGAGATC TTCTAGAAAG 
+     3721 ATA
+//
\ No newline at end of file