annotate g_read_sents.xml @ 3:0df72a8ab095 draft default tip

planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit f2432aaedd36ae7662873623d8861d0982dffdd2
author stevecassidy
date Mon, 20 Nov 2017 22:52:11 -0500
parents a47980ef2b96
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
1 <tool id="ReadSents" name="Sentence Segmenter" version="1.0">
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
2 <description>Segments the text input into separate sentences</description>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
3
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
4 <requirements>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
5 <requirement type="package" version="3.2.1">nltk</requirement>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
6 </requirements>
2
a47980ef2b96 planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit b5b26e9118f2ad8af109d606746b39a5588f0511-dirty
stevecassidy
parents: 0
diff changeset
7
0
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
8 <command interpreter="python">
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
9 g_read_sents.py --input $input1 --output $tab_file
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
10 </command>
2
a47980ef2b96 planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit b5b26e9118f2ad8af109d606746b39a5588f0511-dirty
stevecassidy
parents: 0
diff changeset
11
0
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
12 <inputs>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
13 <param name="input1" type="data" format="txt" label="Select a suitable input file from your history"/>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
14 <param name="job_name" type="text" size="25"
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
15 label="Supply a name for the outputs to remind you what they contain" value="Sentence Segmenter"/>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
16
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
17 </inputs>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
18 <outputs>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
19 <data format="txt" name="tab_file" label="${job_name}"/>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
20
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
21 </outputs>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
22 <options refresh="True"/>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
23 <help>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
24 <![CDATA[
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
25
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
26 Segment text input into sentences using the Punkt sentence segmenter. Output is one sentence per line.
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
27
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
28 ]]>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
29
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
30 </help>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
31 </tool>