annotate g_frequency.xml @ 3:0df72a8ab095 draft default tip

planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit f2432aaedd36ae7662873623d8861d0982dffdd2
author stevecassidy
date Mon, 20 Nov 2017 22:52:11 -0500
parents e991d4e60c17
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
1 <tool id="Frequency" name="Frequency List" version="1.0">
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
2 <description>Takes a text input and generates a frequency list</description>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
3
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
4 <requirements>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
5 <requirement type="package" version="3.2.1">nltk</requirement>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
6 </requirements>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
7
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
8 <command interpreter="python">
3
0df72a8ab095 planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit f2432aaedd36ae7662873623d8861d0982dffdd2
stevecassidy
parents: 0
diff changeset
9 g_frequency.py --input "${",".join(map(str, $input))}" --output $frequency_table
0
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
10 </command>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
11
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
12 <inputs>
3
0df72a8ab095 planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit f2432aaedd36ae7662873623d8861d0982dffdd2
stevecassidy
parents: 0
diff changeset
13 <param name="input" type="data" format="txt" multiple="true"
0df72a8ab095 planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit f2432aaedd36ae7662873623d8861d0982dffdd2
stevecassidy
parents: 0
diff changeset
14 label="Input text(s)"/>
0
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
15 </inputs>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
16 <outputs>
3
0df72a8ab095 planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit f2432aaedd36ae7662873623d8861d0982dffdd2
stevecassidy
parents: 0
diff changeset
17 <data format="tabular" name="frequency_table" label="Frequency Table"/>
0
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
18 </outputs>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
19
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
20 <tests>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
21 <test>
3
0df72a8ab095 planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit f2432aaedd36ae7662873623d8861d0982dffdd2
stevecassidy
parents: 0
diff changeset
22 <param name='input' value='sample_text.txt'/>
0df72a8ab095 planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit f2432aaedd36ae7662873623d8861d0982dffdd2
stevecassidy
parents: 0
diff changeset
23 <output name='frequency_table' file='sample_text_frequency.dat'/>
0
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
24 </test>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
25 </tests>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
26 <help>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
27 Generate a frequency list from a text ordered by word frequency.
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
28 </help>
e991d4e60c17 planemo upload commit 0203cb3a0b40d9348674b2b098af805e2986abca-dirty
stevecassidy
parents:
diff changeset
29 </tool>