Mercurial > repos > stevecassidy > alveoimport
comparison util.py @ 18:5e1b7d922ea3 draft default tip
planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit 53cde5cc9b8c1adcccdc3cfa52d8ca82079aeda7
| author | stevecassidy |
|---|---|
| date | Mon, 15 Jan 2018 18:34:57 -0500 |
| parents | a38315ecf593 |
| children |
comparison
equal
deleted
inserted
replaced
| 17:b69f6d41d17c | 18:5e1b7d922ea3 |
|---|---|
| 23 | 23 |
| 24 :raises: pyalveo.APIError if the API request is not successful | 24 :raises: pyalveo.APIError if the API request is not successful |
| 25 | 25 |
| 26 """ | 26 """ |
| 27 # validate the client key, raises an exception if it is not valid | 27 # validate the client key, raises an exception if it is not valid |
| 28 client_module.Client(api_key, API_URL, use_cache=False) | 28 client_module.Client(api_key=api_key, api_url=API_URL, use_cache=False) |
| 29 outfile = open(output_path, 'w') | 29 outfile = open(output_path, 'w') |
| 30 outfile.write(api_key) | 30 outfile.write(api_key) |
| 31 outfile.close() | 31 outfile.close() |
| 32 | 32 |
| 33 | 33 |
| 51 itemurls.append(row['ItemURL']) | 51 itemurls.append(row['ItemURL']) |
| 52 | 52 |
| 53 itemlist = pyalveo.ItemGroup(itemurls, client) | 53 itemlist = pyalveo.ItemGroup(itemurls, client) |
| 54 | 54 |
| 55 return itemlist | 55 return itemlist |
| 56 |