Mercurial > repos > stephenshank > seqcomplexity

changeset 0:6d8551c2dcc9 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/stephenshank/tools-iuc/tree/seqcomplexity/tools/seqcomplexity/ commit feda4e2ea70c013fcddd1dbdeab73158fe9c86a4"
author stephenshank
date Mon, 23 May 2022 21:19:04 +0000
parents
children
files seqcomplexity.xml
diffstat 1 files changed, 23 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/seqcomplexity.xml	Mon May 23 21:19:04 2022 +0000
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<tool id="seqcomplexity" name="Sequence Complexity" version="0.0.1">
+    <description>Calculate sequence complexity (total and per read)</description>
+    <requirements>
+        <requirement type="package" version="0.1.0">seqcomplexity</requirement>
+    </requirements>
+    <command detect_errors="exit_code"><![CDATA[
+      seqcomplexity -q $input_fastq > $output_json
+        ]]>
+    </command>
+    <inputs>
+        <param name="input_fastq" type="data" format="fastq" label="Input reads in FASTQ format" />
+    </inputs>
+    <outputs>
+        <data name="output_json" format="json"/>
+    </outputs>
+    <tests>
+    </tests>
+    <help>
+    </help>
+    <citations>
+    </citations>
+</tool>