Mercurial > repos > stemcellcommons > spp_tool
diff spp_wrapper.py @ 16:ea38ad1cfb62 draft default tip
Replace simplejson with json.
author | stemcellcommons |
---|---|
date | Thu, 10 Apr 2014 13:01:06 -0400 |
parents | 64f2784d471f |
children |
line wrap: on
line diff
--- a/spp_wrapper.py Tue Oct 15 15:43:49 2013 -0400 +++ b/spp_wrapper.py Thu Apr 10 13:01:06 2014 -0400 @@ -5,14 +5,12 @@ import sys, subprocess, tempfile, shutil, glob, os, os.path, gzip from galaxy import eggs -import pkg_resources -pkg_resources.require( "simplejson" ) -import simplejson +import json CHUNK_SIZE = 1024 def main(): - options = simplejson.load( open( sys.argv[1] ) ) + options = json.load( open( sys.argv[1] ) ) output_narrow_peak = sys.argv[2] output_region_peak = sys.argv[3] output_peakshift_file = sys.argv[4] @@ -99,4 +97,4 @@ os.unlink( stderr_name ) #os.rmdir( tmp_dir ) -if __name__ == "__main__": main() \ No newline at end of file +if __name__ == "__main__": main()