Mercurial > repos > stemcellcommons > macs2

diff macs2_wrapper.xml @ 17:e047d7bbace9

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Remove MACS2 external dependency. Change tool name and version number.
author Ilya Sytchev <isytchev@hsph.harvard.edu>
date Tue, 15 Oct 2013 16:33:52 -0400
parents 522a47128d55
children db2805f9df66
line wrap: on
line diff
--- a/macs2_wrapper.xml	Fri Jan 25 11:49:55 2013 -0500
+++ b/macs2_wrapper.xml	Tue Oct 15 16:33:52 2013 -0400
@@ -1,9 +1,4 @@
-<tool id="modencode_peakcalling_macs2" name="MACS2" version="2.0.10.2">
-  <requirements>
-    <requirement type="python-module">macs2</requirement>
-    <requirement type="package" version="2.0.10.2">macs2</requirement>
-    <!--<requirement type="set_environment">SCRIPT_PATH</requirement>-->
-  </requirements>
+<tool id="macs2_peakcalling" name="MACS2" version="2.0.10">
   <description>Model-based Analysis of ChIP-Seq</description>
   <command interpreter="python">macs2_wrapper.py $options_file $outputs_file</command>
   <inputs>
@@ -230,4 +225,4 @@
 
 Integration of MACS2 with Galaxy performed by Ziru Zhou ( ziruzhou@gmail.com ). Please send your comments/questions to modENCODE DCC at help@modencode.org.
   </help>
-</tool>
\ No newline at end of file
+</tool>