Mercurial > repos > stef > qdnaseq_test

diff QDNAseq.xml @ 9:4efd258b33d9 draft

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Uploaded
author stef
date Fri, 31 Oct 2014 07:13:53 -0400
parents d4d58887f008
children 0e5432d467fa
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--- a/QDNAseq.xml	Mon Oct 27 05:38:16 2014 -0400
+++ b/QDNAseq.xml	Fri Oct 31 07:13:53 2014 -0400
@@ -3,8 +3,8 @@
   <requirements>
     
     <!-- R 3.1.0 dependency will be used instead when available, now default R is used, see command -->
-    <requirement type="package" version="3.1.0">R</requirement>
-    <requirement type="package" version="1.0.5">qdnaseq</requirement>
+    <!-- <requirement type="package" version="3.1.0">R</requirement> -->
+    <!-- <requirement type="package" version="1.0.5">qdnaseq</requirement> -->
     <requirement type="package" version="0.1.18">samtools</requirement>
   </requirements>
 
@@ -14,6 +14,7 @@
   <command interpreter="Rscript"> 
     QDNAseq.R 
     $qdnaseq_cfg
+    $INSTALL_DIR
   </command>
 
   <stdio>