# HG changeset patch
# User stef
# Date 1403091919 14400
# Node ID 40ae4457462480ae0b189d25b2d78bc7c4e2d319
# Parent  3716bb4260fd809a033f3f17e9eb88dc9c76de43
Uploaded

diff -r 3716bb4260fd -r 40ae44574624 QDNAseq.xml
--- a/QDNAseq.xml	Wed Jun 18 06:02:20 2014 -0400
+++ b/QDNAseq.xml	Wed Jun 18 07:45:19 2014 -0400
@@ -9,6 +9,14 @@
 
   <description>Quantitative copy number abberation detection</description>
   
+  <!-- 
+  if case you want to use a specific R installation use the commented command block and set correct path
+  <command>
+     /ccagc/lib/R/R-3.1.0/bin/Rscript QDNAseq.R 
+    $qdnaseq_cfg
+  </command>
+  -->
+
   <command interpreter="Rscript">
     QDNAseq.R 
     $qdnaseq_cfg <!-- use a tmp config file to pass all params to R by source() -->