Mercurial > repos > stef > qdnaseq

comparison QDNAseq.R @ 45:945d3f371e1a draft

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Uploaded
author stef
date Sun, 03 Aug 2014 11:25:59 -0400
parents 4351c7715275
children 8434589e692c
comparison
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44:4372afee310b 45:945d3f371e1a
175 175
176 systemUser <- system("whoami",T) 176 systemUser <- system("whoami",T)
177 qdnaseqVersion <- packageDescription( "QDNAseq" )$Version 177 qdnaseqVersion <- packageDescription( "QDNAseq" )$Version
178 catMsg( c("Analysis run with user: ", systemUser ) ) 178 catMsg( c("Analysis run with user: ", systemUser ) )
179 catMsg( c("QDNAseq version loaded: ", qdnaseqVersion) ) 179 catMsg( c("QDNAseq version loaded: ", qdnaseqVersion) )
180 catMsg( c( sessionInfo()$R.version$version.string ) )
180 181
181 ## get the comma separated list of chromosomes to exclude 182 ## get the comma separated list of chromosomes to exclude
182 excludeChrs <- unlist( strsplit( excludeChrsString, ",") ) 183 excludeChrs <- unlist( strsplit( excludeChrsString, ",") )
183 184
184 ## ------------------------ 185 ## ------------------------