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comparison QDNAseq.R @ 26:2efda0ed7ccf draft

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Uploaded
author stef
date Wed, 18 Jun 2014 05:09:43 -0400
parents 8509c112abaa
children 40ae95ad9d8c
comparison
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25:8509c112abaa 26:2efda0ed7ccf
184 suppressWarnings( suppressMessages( library( QDNAseq, quietly = TRUE ) ) ) 184 suppressWarnings( suppressMessages( library( QDNAseq, quietly = TRUE ) ) )
185 suppressWarnings( suppressMessages( library( CGHcall, quietly = TRUE ) ) ) 185 suppressWarnings( suppressMessages( library( CGHcall, quietly = TRUE ) ) )
186 186
187 qdnaseqVersion <- packageDescription( "QDNAseq" )$Version 187 qdnaseqVersion <- packageDescription( "QDNAseq" )$Version
188 qdnaseqDate <- packageDescription( "QDNAseq" )$Date 188 qdnaseqDate <- packageDescription( "QDNAseq" )$Date
189 catMsg( "QDNAseq info: version(", qdnaseqVersion, ") and date (", qdnaseqDate, ")" ) 189 catMsg( paste("QDNAseq info: version(", qdnaseqVersion, ") and date (", qdnaseqDate, ")", sep="") )
190 190
191 ## only one param: the tmp config file 191 ## only one param: the tmp config file
192 cmdLineArgs <- commandArgs(TRUE) 192 cmdLineArgs <- commandArgs(TRUE)
193 config <- cmdLineArgs[1] 193 config <- cmdLineArgs[1]
194 194