# HG changeset patch
# User stef
# Date 1410425465 14400
# Node ID ff8a335e18f29c2aaeba7d9e2d9b95104304f4fe

Uploaded

diff -r 000000000000 -r ff8a335e18f2 tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Sep 11 04:51:05 2014 -0400
@@ -0,0 +1,30 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    
+    <package name="R" version="3.0.3">
+        <repository name="package_r_3_0_3" toolshed="http://toolshed.g2.bx.psu.edu" owner="iuc" changeset_revision="f386d7431fe0" />
+        <readme>Let's see where this msg appears...R</readme>
+    </package>
+    
+    <package name="samtools" version="0.1.18">
+        <repository name="package_samtools_0_1_18" toolshed="http://toolshed.g2.bx.psu.edu" owner="devteam" changeset_revision="171cd8bc208d"/>
+        <readme>Let's see where this msg appears...samtools</readme>
+    </package>
+    
+    <package name="snpeff" version="3.4">
+        <repository name="package_snpeff_3_4" toolshed="http://toolshed.g2.bx.psu.edu" owner="iuc" changeset_revision="af7ff8187d09"/>
+        <readme>Let's see where this msg appears...snpeff</readme>
+    </package>
+    
+    <package name="varscan" version="2">
+        <repository name="varscan_version_2" toolshed="http://toolshed.g2.bx.psu.edu" owner="devteam" changeset_revision="6f8cead3dc93"/>
+        <readme>Let's see where this msg appears...varscan</readme>
+    </package>
+    
+    <!-- TXT -->
+    <set_environment version="1.0">
+        <environment_variable action="set_to" name="TOOL_DIR">$REPOSITORY_INSTALL_DIR</environment_variable>
+        <readme>Let's see where this msg appears...ENV VAR</readme>
+    </set_environment>
+    
+</tool_dependency>