# HG changeset patch
# User stef
# Date 1412767314 14400
# Node ID d39b9c8741e866a5610a01dd9a7386d91b55ddd4
# Parent  5d9546a5bad52b0842f5e9cbcc8f4e2ba12e4427
Uploaded

diff -r 5d9546a5bad5 -r d39b9c8741e8 tool_dependencies.xml
--- a/tool_dependencies.xml	Wed Oct 08 07:21:46 2014 -0400
+++ b/tool_dependencies.xml	Wed Oct 08 07:21:54 2014 -0400
@@ -32,6 +32,14 @@
         <environment_variable action="set_to" name="TOOL_DIR">$REPOSITORY_INSTALL_DIR</environment_variable>
         <readme>Let's see where this msg appears...ENV VAR</readme>
     </set_environment>
+    <set_environment version="1.0">
+        <environment_variable action="set_to" name="JAR_PATH1">$JAVA_JAR_PATH</environment_variable>
+        <readme>Let's see where this msg appears...ENV VAR</readme>
+    </set_environment>
+    <set_environment version="1.0">
+        <environment_variable action="set_to" name="JAR_PATH2">$SNPEFF_JAR_PATH</environment_variable>
+        <readme>Let's see where this msg appears...ENV VAR</readme>
+    </set_environment>
     
     <!--<environment_variable action="set_to" name="VARSCAN_DIR">$JAVA_JAR_PATH</environment_variable>-->