# HG changeset patch # User stef # Date 1412938674 14400 # Node ID c7203abb7040cc9c3e8a059e63bfc2fc226c3bf7 # Parent 3419fc80819330722f172eec37792d56b8a8301e Uploaded diff -r 3419fc808193 -r c7203abb7040 falco-call.sh --- a/falco-call.sh Fri Oct 10 06:33:58 2014 -0400 +++ b/falco-call.sh Fri Oct 10 06:57:54 2014 -0400 @@ -65,11 +65,11 @@ echo "------ --- ------" echo "------ sam ------" echo "------ --- ------" -samtools +$samtools echo "------ --- ------" echo "------ bcf ------" echo "------ --- ------" -bcftools +$bcftools #echo "--- snpsift ---" #java -jar $snpSift/SnpSift.jar #echo "--- snpeff ---"