# HG changeset patch
# User stef
# Date 1412767536 14400
# Node ID baa2ff7d082a331bc22ff876d3e1f73a4aa955ca
# Parent  d39b9c8741e866a5610a01dd9a7386d91b55ddd4
Uploaded

diff -r d39b9c8741e8 -r baa2ff7d082a falco.xml
--- a/falco.xml	Wed Oct 08 07:21:54 2014 -0400
+++ b/falco.xml	Wed Oct 08 07:25:36 2014 -0400
@@ -81,10 +81,10 @@
       html_out=$html_output
       vcf_out=$vcf_output
       out_path=${html_output.files_path}
-      jar_path1=\$JAR_PATH1
-      jar_path2=\$JAR_PATH2
-      jar_path3=\$JAVA_JAR_PATH
-      jar_path4=\$SNPEFF_JAR_PATH
+      jar_path1=$JAR_PATH1
+      jar_path2=$JAR_PATH2
+      jar_path3=$JAVA_JAR_PATH
+      jar_path4=$SNPEFF_JAR_PATH
     </configfile>
   </configfiles>