view falco/ref/filters/CosmicNonCodingVariants_v64_26032013_noLimit_wgs.f.vcf @ 59:73eda23fb8fd draft

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##fileformat=VCFv4.1
##source=COSMICv64
##reference=GRCh37
##fileDate=20130327
##comment="Missing nucleotide details indicate ambiguity during curation process"
##comment="URL stub for COSM ID field='http://www.sanger.ac.uk/cgi-bin/genetics/CGP/directive?id='"
##comment="REF and ALT sequences are both forward strand
##INFO=<ID=GENE,Number=1,Type=String,Description="Gene name">
##INFO=<ID=STRAND,Number=1,Type=String,Description="Gene strand">
##INFO=<ID=CDS,Number=1,Type=String,Description="CDS annotation">
##INFO=<ID=AA,Number=1,Type=String,Description="Peptide annotation">
##INFO=<ID=CNT,Number=1,Type=Integer,Description="How many samples have this mutation">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO
1	115258837	COSN414678	C	A	.	.	.
1	115258837	COSN414677	C	A	.	.	.
1	115258839	COSN414680	T	C	.	.	.
1	115258839	COSN414679	T	C	.	.	.
10	43613962	COSN424480	C	A	.	.	GENE=RET;STRAND=+
10	43617488	COSN424483	G	T	.	.	GENE=RET;STRAND=+
10	89720899	COSN425590	G	T	.	.	GENE=PTEN;STRAND=+
13	48955592	COSN215086	A	C	.	.	GENE=RB1;STRAND=+
13	49027259	COSN434910	A	G	.	.	GENE=RB1_ENST00000267163;STRAND=+
17	7578359	COSN504283	C	T	.	.	GENE=TP53;STRAND=-
19	3118848	COSN449010	T	G	.	.	GENE=GNA11;STRAND=+
19	3121198	COSN498712	G	A	.	.	.
2	132181403	COSN452344	G	C	.	.	.
2	212589935	COSN214321	A	G	.	.	GENE=ERBB4;STRAND=-
22	17052984	COSN460731	A	G	.	.	.
22	17055427	COSN166685	G	T	.	.	.
22	24143286	COSN169414	C	T	.	.	GENE=SMARCB1;STRAND=+
4	55593344	COSN467850	C	A	.	.	GENE=KIT;STRAND=+
4	55593517	COSN467851	G	C	.	.	GENE=KIT;STRAND=+
4	55599403	COSN467856	G	T	.	.	GENE=KIT;STRAND=+
4	55973071	COSN467867	T	A	.	.	GENE=KDR;STRAND=-
4	55980471	COSN167219	C	A	.	.	GENE=KDR;STRAND=-
5	149453163	COSN470115	C	A	.	.	GENE=CSF1R;STRAND=-
5	149453163	COSN470116	C	A	.	.	GENE=CSF1R;STRAND=-
7	55211207	COSN479937	G	C	.	.	GENE=EGFR;STRAND=+
7	65970233	COSN480663	G	T	.	.	.
7	65970320	COSN480664	G	A	.	.	.
7	65970329	COSN480666	G	T	.	.	.
7	65970329	COSN480665	G	T	.	.	.
7	116340357	COSN476961	C	A	.	.	GENE=MET;STRAND=+
7	128851663	COSN477274	G	A	.	.	GENE=SMO;STRAND=+
9	33675634	COSN486051	G	T	.	.	.
9	33675675	COSN232514	A	N	.	.	.
9	33675970	COSN232057	G	N	.	.	.
9	33676082	COSN486052	G	A	.	.	.
9	33676271	COSN486053	C	T	.	.	.
9	33676373	COSN486054	G	T	.	.	.
9	33676393	COSN486055	G	A	.	.	.
9	80336213	COSN502865	G	A	.	.	.