Mercurial > repos > stef > falco

diff falco-call.sh @ 31:c7203abb7040 draft

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Uploaded
author stef
date Fri, 10 Oct 2014 06:57:54 -0400
parents 02e5aee670de
children 3d3afdb4a34f
line wrap: on
line diff
--- a/falco-call.sh	Fri Oct 10 06:33:58 2014 -0400
+++ b/falco-call.sh	Fri Oct 10 06:57:54 2014 -0400
@@ -65,11 +65,11 @@
 echo "------ --- ------"
 echo "------ sam ------"
 echo "------ --- ------"
-samtools
+$samtools
 echo "------ --- ------"
 echo "------ bcf ------"
 echo "------ --- ------"
-bcftools
+$bcftools
 #echo "--- snpsift ---"
 #java -jar $snpSift/SnpSift.jar
 #echo "--- snpeff ---"