Mercurial > repos > stef > falco
diff tool-data/all_fasta.loc.sample @ 55:55a9c30fc11c draft
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| author | stef |
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| date | Wed, 31 Dec 2014 07:18:19 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/all_fasta.loc.sample Wed Dec 31 07:18:19 2014 -0500 @@ -0,0 +1,26 @@ +#This is a sample file distributed with Galaxy that enables tools +#to use a directory with indexed fasta files. The all_fasta.loc file has +#this format (longer white space characters are TAB characters): +# +#<unique_build_id> <dbkey> <display_name> <file_path> +# +#So, for example, if you had phiX indexed stored in +#/example/path/ +#then the all_fasta.loc entry would look like this: +# +#phiX174 phiX phiX Pretty /example/path/phiX.fa +# +#and your /example/path/ directory +#would contain phiX.fa.* files: +# +# phiX.fa.fai +# phiX.fa.dict +# +#Your all_fasta.loc file should include an entry per line for each +#index set you have stored. For example: +# +#phiX174 phiX phiX174 /path/to/phiX.fa +#hg18 hg18 hg18 Full /path/to/hg18full.fa +#hg19 hg19 hg19 /path/to/hg19.fa +#...etc... +#