# HG changeset patch
# User slugger70@gmail.com
# Date 1409035436 -36000
# Node ID 409688c460e0b050a6a985b5d5063365e64d0500
# Parent  b3cf551dc5f450f97d1749d1ca51874d3c12259e
Changed version of barrnap to 0.3 and used IUC's package.

diff -r b3cf551dc5f4 -r 409688c460e0 barrnap_wrapper.xml
--- a/barrnap_wrapper.xml	Tue Sep 03 00:08:18 2013 -0400
+++ b/barrnap_wrapper.xml	Tue Aug 26 16:43:56 2014 +1000
@@ -1,7 +1,7 @@
-<tool id="barrnap" name="barrnap" version="1.0.0">
+<tool id="barrnap" name="barrnap" version="1.0.1">
     <description>Locate bacterial ribosomal RNA's in a fasta file. (GFF output)</description>
     <requirements>
-        <requirement type="package" version="0.1">package_barrnap_0_1</requirement>
+        <requirement type="package" version="0.3">package_barrnap_0_3</requirement>
     </requirements>
     <command>
 		barrnap
diff -r b3cf551dc5f4 -r 409688c460e0 tool_dependencies.xml
--- a/tool_dependencies.xml	Tue Sep 03 00:08:18 2013 -0400
+++ b/tool_dependencies.xml	Tue Aug 26 16:43:56 2014 +1000
@@ -1,18 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="package_barrnap_0_1" version="0.1">
-        <install version="1.0">
-            <actions>
-                <action type="download_by_url">http://www.vicbioinformatics.com/barrnap-0.1.tar.gz</action>
-                <action type="move_directory_files">
-                    <source_directory>.</source_directory>
-                    <destination_directory>$INSTALL_DIR/bin</destination_directory>
-                </action>
-                <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
-                </action>
-                <action type="shell_command">chmod ugo+x $INSTALL_DIR/bin/barrnap</action>
-            </actions>
-        </install>
+    <package name="package_barrnap_0_3" version="0.3">
+        <repository name="package_barrnap_0_3" />
     </package>
 </tool_dependency>