# HG changeset patch
# User shian_su <registertonysu@gmail.com>
# Date 1416456017 -39600
# Node ID bd95fa63dd036a6498c8018cb06ce49a99c7062a
# Parent  d59334f0cfe4b4842546c93e689ab8fe7ce84e2e
- Commented out tarball downloads

diff -r d59334f0cfe4 -r bd95fa63dd03 tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Nov 20 14:57:09 2014 +1100
+++ b/tool_dependencies.xml	Thu Nov 20 15:00:17 2014 +1100
@@ -4,7 +4,7 @@
         <repository name="package_r_3_1_1" owner="fubar" prior_installation_required="True" />
     </package>
     
-    <!--
+
      <package name="shrnaseq" version="1.2.1">
         <install version="1.0">
             <actions>
@@ -13,7 +13,7 @@
                         <package name="R_3_1_1" version="3.1.1" />
                     </repository>
                 </action>
-                
+                <!--
                 <action type="download_file">https://github.com/Shians/diffexp/raw/master/dependencies/locfit_1.5-9.1.tar.gz</action>
                 <action type="download_file">https://github.com/Shians/diffexp/raw/master/dependencies/statmod_1.4.20.tar.gz</action>
                 <action type="download_file">https://github.com/Shians/diffexp/commits/master/dependencies/limma_3.22.1.tar.gz</action>
@@ -27,6 +27,7 @@
                 <action type="set_environment">
                     <environment_variable action="append_to" name="R_LIBS">$INSTALL_DIR/shrnaseq/</environment_variable>
                 </action>
+                -->
             </actions>
         </install>
         <readme>
@@ -34,5 +35,5 @@
             http://bioconductor.org/packages/release/bioc/html/edgeR.html
         </readme>
     </package>
-     -->
+
 </tool_dependency>