# HG changeset patch
# User sh477
# Date 1649262396 0
# Node ID 0f4f67891031dc59148c1dbc5c392906f7783f1f
# Parent  36e0e1c3fd71432f9bf17a2a1fd636a54a014938
Uploaded

diff -r 36e0e1c3fd71 -r 0f4f67891031 tool-data/dbkeys.loc.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/dbkeys.loc.sample	Wed Apr 06 16:26:36 2022 +0000
@@ -0,0 +1,1 @@
+#<dbkey>		<display_name>	<len_file_path>
\ No newline at end of file
diff -r 36e0e1c3fd71 -r 0f4f67891031 tool-data/vep_versioned_annotation_cache.loc.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/vep_versioned_annotation_cache.loc.sample	Wed Apr 06 16:26:36 2022 +0000
@@ -0,0 +1,11 @@
+#This file describes vep cache data and its metadata available on the server.
+#The data table has the format (white space characters are TAB characters):
+#
+#<value>									<dbkey>			<version>		<cachetype>		<name>								<species>			<path>
+#
+#So, vep_versioned_annotation_cache.loc tables could look like this:
+#
+#homo_sapiens_vep_105_GRCh38				hg38			105				default			Homo sapiens hg38 (V105)			homo_sapiens		/path/to/vep_versioned_annotation_cache/105/hg38/default
+#homo_sapiens_refseq_vep_105_GRCh38			hg38			105				refseq			Homo sapiens hg38 (V105, Refseq)	homo_sapiens		/path/to/vep_versioned_annotation_cache/105/hg38/refseq
+#homo_sapiens_merged_vep_105_GRCh38			hg38			105				merged			Homo sapiens hg38 (V105, Merged)	homo_sapiens		/path/to/vep_versioned_annotation_cache/105/hg38/merged
+#
\ No newline at end of file
diff -r 36e0e1c3fd71 -r 0f4f67891031 tool_data_table_conf.xml.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Wed Apr 06 16:26:36 2022 +0000
@@ -0,0 +1,12 @@
+<tables>
+    <!-- Table of installed versioned vep cache data -->
+    <table name="vep_versioned_annotation_cache" comment_char="#">
+        <columns>value, dbkey, version, cachetype, name, species, path</columns>
+        <file path="tool-data/vep_versioned_annotation_cache.loc" />
+    </table>
+    <!-- Locations of dbkeys and len files under genome directory -->
+    <table name="__dbkeys__" comment_char="#">
+        <columns>value, name, len_path</columns>
+        <file path="tool-data/dbkeys.loc" />
+    </table>
+</tables>
\ No newline at end of file