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author sh477
date Tue, 05 Apr 2022 18:10:59 +0000
parents 7890790d2afd
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<?xml version="1.0"?>
<data_managers>
    <data_manager tool_file="data_manager/data_manager_vep_cache_download.xml" id="data_manager_vep_cache_download" >
        <data_table name="vep_versioned_annotation_cache">  <!-- Defines a Data Table to be modified. -->
            <output> <!-- Handle the output of the Data Manager Tool -->
                <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="version" /> <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="cachetype" />  <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
				<column name="species" />  <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">vep/${version}/${dbkey}/${cachetype}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/vep/${version}/${dbkey}/${cachetype}/</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>