# HG changeset patch
# User serranop
# Date 1379100268 14400
# Node ID af823fe7772ba2ae405ba9375c1910d484d37334
# Parent  5b3a8f988b81db6ea42cc152a560f9987d41d16c
Updated option

diff -r 5b3a8f988b81 -r af823fe7772b usearch_fastq_mergepairs.xml
--- a/usearch_fastq_mergepairs.xml	Fri Sep 13 15:08:16 2013 -0400
+++ b/usearch_fastq_mergepairs.xml	Fri Sep 13 15:24:28 2013 -0400
@@ -5,6 +5,7 @@
 -fastq_mergepairs '$input_forward'
 -reverse '$input_reverse'
 #if $minovlen.minovlen_val == '-1':
+-fastq_minovlen 0
 #else
 -fastq_minovlen $minovlen
 #end if
@@ -16,12 +17,9 @@
         <param name="input_reverse" type="data" format="fastq,fastqsanger,fastqcssanger" label="File with reverse reads" />
         <conditional name="minovlen">
             <param name="minovlen_val" type="integer" value="-1" label="Minimum length of the overlap" help="'-1' means no minimum." />
-            <when value="-1">
-            </when>
-            <when value="0">
-            </when>
+            <when value="-1"></when>
         </conditional>
-        <param name="qmax" type="integer" value="41" label="Maximum Q score (input files)." />
+        <param name="qmax" type="integer" value="41" label="Maximum Q score for input files" />
     </inputs>
     <outputs>
         <data name='output' format='fastq' label="Merge result" />