annotate Test_workflow__SPP_analog.ga @ 2:204d845997ed draft default tip

Uploaded
author scottx611x
date Mon, 26 Nov 2018 14:34:52 -0500
parents eb72179f594b
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
1 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
2 "a_galaxy_workflow": "true",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
3 "annotation": "{\n\t\"description\": \"Test workflow SPP analog\",\n\t\t\"file_relationship\": {\n\t\t \"value_type\": \"LIST\",\n\t\t \"name\": \"List of Paired Input files\",\n \"file_relationship\": {\n\t\t\t\"file_relationship\": {},\n\t\t\t\"value_type\": \"PAIR\",\n\t\t\t\"name\": \"Paired Input files\",\n\t\t\t\"input_files\": [{\n\t\t\t\t\t\"allowed_filetypes\": [{\"name\": \"TXT\"}],\n\t\t\t\t\t\"name\": \"Tag File\",\n\t\t\t\t\t\"description\": \"Input Tag File\"\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\t\"allowed_filetypes\": [{\"name\": \"TXT\"}],\n\t\t\t\t\t\"name\": \"Control File\",\n\t\t\t\t\t\"description\": \"Input Control File\"\n\t\t\t\t}\n\t\t\t]\n\t\t}\n }\n}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
4 "format-version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
5 "name": "Test workflow: SPP analog",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
6 "steps": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
7 "0": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
8 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
9 "content_id": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
10 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
11 "id": 0,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
12 "input_connections": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
13 "inputs": [],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
14 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
15 "name": "Input dataset collection",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
16 "outputs": [],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
17 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
18 "left": 179.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
19 "top": 350.5
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
20 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
21 "tool_id": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
22 "tool_state": "{\"collection_type\": \"paired\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
23 "tool_version": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
24 "type": "data_collection_input",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
25 "uuid": "91742ad7-8c63-4c6d-9eba-a06e49f0919a",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
26 "workflow_outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
27 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
28 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
29 "output_name": "output",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
30 "uuid": "fb1d7e2e-169b-4992-9e0f-ef50bcdfb4df"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
31 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
32 ]
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
33 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
34 "1": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
35 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
36 "content_id": "toolshed.g2.bx.psu.edu/repos/refinery-platform/split_paired_collection/split_paired_collection/0.2",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
37 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
38 "id": 1,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
39 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
40 "input_collection": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
41 "id": 0,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
42 "output_name": "output"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
43 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
44 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
45 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
46 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
47 "description": "runtime parameter for tool Split Paired Collection",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
48 "name": "input_collection"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
49 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
50 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
51 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
52 "name": "Split Paired Collection",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
53 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
54 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
55 "name": "forward_element",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
56 "type": "data"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
57 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
58 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
59 "name": "reverse_element",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
60 "type": "data"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
61 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
62 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
63 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
64 "left": 477.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
65 "top": 346.5
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
66 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
67 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
68 "ChangeDatatypeActionforward_element": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
69 "action_arguments": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
70 "newtype": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
71 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
72 "action_type": "ChangeDatatypeAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
73 "output_name": "forward_element"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
74 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
75 "ChangeDatatypeActionreverse_element": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
76 "action_arguments": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
77 "newtype": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
78 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
79 "action_type": "ChangeDatatypeAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
80 "output_name": "reverse_element"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
81 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
82 "HideDatasetActionforward_element": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
83 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
84 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
85 "output_name": "forward_element"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
86 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
87 "HideDatasetActionreverse_element": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
88 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
89 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
90 "output_name": "reverse_element"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
91 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
92 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
93 "tool_id": "toolshed.g2.bx.psu.edu/repos/refinery-platform/split_paired_collection/split_paired_collection/0.2",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
94 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
95 "changeset_revision": "3a60513b51a2",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
96 "name": "split_paired_collection",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
97 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
98 "tool_shed": "toolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
99 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
100 "tool_state": "{\"__page__\": null, \"__rerun_remap_job_id__\": null, \"input_collection\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
101 "tool_version": "0.2",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
102 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
103 "uuid": "65d6b62c-9fcb-4779-a4a7-f0cfd2ece6a3",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
104 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
105 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
106 "2": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
107 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
108 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
109 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
110 "id": 2,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
111 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
112 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
113 "id": 1,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
114 "output_name": "forward_element"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
115 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
116 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
117 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
118 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
119 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
120 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
121 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
122 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
123 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
124 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
125 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
126 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
127 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
128 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
129 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
130 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
131 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
132 "left": 763.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
133 "top": 317
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
134 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
135 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
136 "HideDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
137 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
138 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
139 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
140 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
141 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
142 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
143 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
144 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
145 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
146 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
147 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
148 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
149 "tool_state": "{\"__page__\": 0, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
150 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
151 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
152 "uuid": "bc924f87-d2a6-4477-89f7-0c0308e8f8a3",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
153 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
154 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
155 "3": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
156 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
157 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
158 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
159 "id": 3,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
160 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
161 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
162 "id": 1,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
163 "output_name": "reverse_element"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
164 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
165 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
166 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
167 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
168 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
169 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
170 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
171 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
172 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
173 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
174 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
175 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
176 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
177 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
178 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
179 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
180 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
181 "left": 765.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
182 "top": 437
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
183 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
184 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
185 "HideDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
186 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
187 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
188 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
189 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
190 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
191 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
192 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
193 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
194 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
195 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
196 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
197 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
198 "tool_state": "{\"__page__\": 0, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
199 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
200 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
201 "uuid": "5f3c2623-fb89-4393-ba29-7ee3f2a00bca",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
202 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
203 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
204 "4": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
205 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
206 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
207 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
208 "id": 4,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
209 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
210 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
211 "id": 2,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
212 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
213 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
214 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
215 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
216 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
217 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
218 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
219 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
220 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
221 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
222 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
223 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
224 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
225 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
226 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
227 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
228 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
229 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
230 "left": 980.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
231 "top": 321
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
232 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
233 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
234 "HideDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
235 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
236 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
237 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
238 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
239 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
240 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
241 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
242 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
243 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
244 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
245 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
246 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
247 "tool_state": "{\"__page__\": 0, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
248 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
249 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
250 "uuid": "24e512de-f882-40e5-bf65-2b2a3e945c00",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
251 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
252 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
253 "5": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
254 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
255 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
256 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
257 "id": 5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
258 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
259 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
260 "id": 3,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
261 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
262 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
263 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
264 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
265 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
266 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
267 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
268 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
269 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
270 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
271 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
272 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
273 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
274 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
275 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
276 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
277 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
278 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
279 "left": 980.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
280 "top": 443
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
281 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
282 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
283 "HideDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
284 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
285 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
286 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
287 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
288 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
289 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
290 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
291 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
292 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
293 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
294 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
295 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
296 "tool_state": "{\"__page__\": 0, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
297 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
298 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
299 "uuid": "4e354bed-9a38-45fa-a726-5d4da8b5e48b",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
300 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
301 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
302 "6": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
303 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
304 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
305 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
306 "id": 6,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
307 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
308 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
309 "id": 4,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
310 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
311 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
312 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
313 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
314 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
315 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
316 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
317 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
318 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
319 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
320 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
321 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
322 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
323 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
324 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
325 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
326 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
327 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
328 "left": 1198.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
329 "top": 326
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
330 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
331 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
332 "HideDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
333 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
334 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
335 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
336 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
337 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
338 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
339 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
340 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
341 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
342 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
343 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
344 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
345 "tool_state": "{\"__page__\": 0, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
346 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
347 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
348 "uuid": "1f44b18f-cdef-4af9-872b-760e8664749a",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
349 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
350 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
351 "7": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
352 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
353 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
354 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
355 "id": 7,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
356 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
357 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
358 "id": 5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
359 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
360 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
361 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
362 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
363 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
364 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
365 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
366 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
367 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
368 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
369 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
370 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
371 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
372 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
373 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
374 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
375 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
376 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
377 "left": 1198.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
378 "top": 445
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
379 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
380 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
381 "HideDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
382 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
383 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
384 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
385 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
386 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
387 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
388 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
389 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
390 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
391 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
392 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
393 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
394 "tool_state": "{\"__page__\": 0, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
395 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
396 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
397 "uuid": "6b124c6d-9991-444c-b677-8a1e976dd0d3",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
398 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
399 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
400 "8": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
401 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
402 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
403 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
404 "id": 8,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
405 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
406 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
407 "id": 6,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
408 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
409 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
410 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
411 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
412 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
413 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
414 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
415 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
416 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
417 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
418 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
419 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
420 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
421 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
422 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
423 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
424 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
425 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
426 "left": 1439.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
427 "top": 287
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
428 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
429 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
430 "RenameDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
431 "action_arguments": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
432 "newname": "test_01"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
433 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
434 "action_type": "RenameDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
435 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
436 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
437 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
438 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
439 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
440 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
441 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
442 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
443 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
444 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
445 "tool_state": "{\"__page__\": null, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
446 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
447 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
448 "uuid": "6c12fe60-10fb-4b89-aca1-8168684f75a9",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
449 "workflow_outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
450 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
451 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
452 "output_name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
453 "uuid": "b1cdfb67-73b9-4638-87cf-5b32040243ac"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
454 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
455 ]
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
456 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
457 "9": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
458 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
459 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_2-6/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
460 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
461 "id": 9,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
462 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
463 "input_file1": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
464 "id": 6,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
465 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
466 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
467 "input_file2": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
468 "id": 7,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
469 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
470 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
471 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
472 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
473 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
474 "description": "runtime parameter for tool Refinery test tool 2-6",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
475 "name": "input_file1"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
476 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
477 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
478 "description": "runtime parameter for tool Refinery test tool 2-6",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
479 "name": "input_file2"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
480 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
481 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
482 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
483 "name": "Refinery test tool 2-6",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
484 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
485 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
486 "name": "output_file1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
487 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
488 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
489 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
490 "name": "output_file2",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
491 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
492 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
493 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
494 "name": "output_file3",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
495 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
496 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
497 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
498 "name": "output_file4",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
499 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
500 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
501 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
502 "name": "output_file5",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
503 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
504 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
505 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
506 "name": "output_file6",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
507 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
508 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
509 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
510 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
511 "left": 1434.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
512 "top": 405
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
513 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
514 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
515 "HideDatasetActionoutput_file1": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
516 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
517 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
518 "output_name": "output_file1"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
519 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
520 "HideDatasetActionoutput_file2": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
521 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
522 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
523 "output_name": "output_file2"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
524 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
525 "HideDatasetActionoutput_file3": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
526 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
527 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
528 "output_name": "output_file3"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
529 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
530 "HideDatasetActionoutput_file4": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
531 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
532 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
533 "output_name": "output_file4"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
534 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
535 "HideDatasetActionoutput_file5": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
536 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
537 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
538 "output_name": "output_file5"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
539 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
540 "HideDatasetActionoutput_file6": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
541 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
542 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
543 "output_name": "output_file6"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
544 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
545 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
546 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_2-6/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
547 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
548 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
549 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
550 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
551 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
552 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
553 "tool_state": "{\"__page__\": 0, \"stdout\": \"\\\"false\\\"\", \"__rerun_remap_job_id__\": null, \"exit_code\": \"\\\"0\\\"\", \"sleep_time\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"input_file1\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"input_file2\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
554 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
555 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
556 "uuid": "60e1e5d6-e3b3-47c4-b1bf-6e8302380d29",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
557 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
558 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
559 "10": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
560 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
561 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
562 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
563 "id": 10,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
564 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
565 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
566 "id": 7,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
567 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
568 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
569 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
570 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
571 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
572 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
573 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
574 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
575 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
576 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
577 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
578 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
579 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
580 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
581 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
582 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
583 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
584 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
585 "left": 1439.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
586 "top": 686
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
587 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
588 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
589 "RenameDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
590 "action_arguments": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
591 "newname": "test_02"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
592 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
593 "action_type": "RenameDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
594 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
595 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
596 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
597 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
598 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
599 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
600 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
601 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
602 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
603 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
604 "tool_state": "{\"__page__\": null, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
605 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
606 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
607 "uuid": "ed365790-6058-4781-b793-d10fb502c501",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
608 "workflow_outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
609 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
610 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
611 "output_name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
612 "uuid": "21b744f7-912d-4e94-aa2b-cae246eb48f0"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
613 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
614 ]
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
615 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
616 "11": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
617 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
618 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
619 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
620 "id": 11,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
621 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
622 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
623 "id": 9,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
624 "output_name": "output_file2"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
625 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
626 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
627 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
628 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
629 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
630 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
631 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
632 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
633 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
634 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
635 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
636 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
637 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
638 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
639 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
640 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
641 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
642 "left": 1650.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
643 "top": 446
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
644 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
645 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
646 "HideDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
647 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
648 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
649 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
650 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
651 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
652 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
653 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
654 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
655 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
656 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
657 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
658 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
659 "tool_state": "{\"__page__\": 0, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
660 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
661 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
662 "uuid": "d972e887-d691-452b-afe0-3feaa6e8e2ad",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
663 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
664 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
665 "12": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
666 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
667 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
668 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
669 "id": 12,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
670 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
671 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
672 "id": 9,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
673 "output_name": "output_file4"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
674 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
675 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
676 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
677 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
678 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
679 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
680 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
681 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
682 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
683 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
684 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
685 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
686 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
687 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
688 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
689 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
690 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
691 "left": 1652.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
692 "top": 568
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
693 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
694 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
695 "HideDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
696 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
697 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
698 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
699 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
700 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
701 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
702 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
703 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
704 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
705 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
706 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
707 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
708 "tool_state": "{\"__page__\": 0, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
709 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
710 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
711 "uuid": "d04c9fd7-0718-4a62-821a-3ccc297f253b",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
712 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
713 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
714 "13": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
715 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
716 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
717 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
718 "id": 13,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
719 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
720 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
721 "id": 11,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
722 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
723 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
724 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
725 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
726 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
727 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
728 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
729 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
730 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
731 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
732 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
733 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
734 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
735 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
736 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
737 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
738 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
739 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
740 "left": 1873.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
741 "top": 448
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
742 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
743 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
744 "HideDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
745 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
746 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
747 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
748 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
749 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
750 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
751 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
752 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
753 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
754 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
755 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
756 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
757 "tool_state": "{\"__page__\": 0, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
758 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
759 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
760 "uuid": "00639c4a-aaf6-44cd-a8fe-48b628ccd1be",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
761 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
762 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
763 "14": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
764 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
765 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
766 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
767 "id": 14,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
768 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
769 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
770 "id": 12,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
771 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
772 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
773 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
774 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
775 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
776 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
777 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
778 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
779 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
780 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
781 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
782 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
783 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
784 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
785 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
786 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
787 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
788 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
789 "left": 1873.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
790 "top": 571
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
791 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
792 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
793 "HideDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
794 "action_arguments": {},
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
795 "action_type": "HideDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
796 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
797 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
798 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
799 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
800 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
801 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
802 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
803 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
804 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
805 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
806 "tool_state": "{\"__page__\": 0, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
807 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
808 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
809 "uuid": "433002cf-6ff4-4ab5-ace0-798f1bfffdb0",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
810 "workflow_outputs": []
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
811 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
812 "15": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
813 "annotation": "{\n \"parameters\": [\n {\n \"name\": \"exit_code\",\n \"description\": \"Exit code for the final Refinery Test Tool 1-1 in the workflow\",\n \"value_type\": \"INTEGER\",\n \"default_value\": 0\n },\n {\n \"name\": \"p_fail\",\n \"description\": \"Probability of failure for the final Refinery Test Tool 1-1 in the workflow\",\n \"value_type\": \"FLOAT\",\n \"default_value\": 0.0\n },\n {\n \"name\": \"empty_outfile\",\n \"description\": \"Whether or not the final Refinery Test Tool 1-1 in the workflow will produce an empty output file\",\n \"value_type\": \"BOOLEAN\",\n \"default_value\": false\n }\n ]\n}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
814 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
815 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
816 "id": 15,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
817 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
818 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
819 "id": 13,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
820 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
821 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
822 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
823 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
824 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
825 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
826 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
827 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
828 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
829 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
830 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
831 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
832 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
833 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
834 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
835 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
836 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
837 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
838 "left": 2098.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
839 "top": 453
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
840 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
841 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
842 "RenameDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
843 "action_arguments": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
844 "newname": "test_03"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
845 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
846 "action_type": "RenameDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
847 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
848 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
849 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
850 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
851 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
852 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
853 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
854 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
855 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
856 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
857 "tool_state": "{\"__page__\": null, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
858 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
859 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
860 "uuid": "f6ba1608-8c0d-41de-8774-6b69c7808370",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
861 "workflow_outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
862 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
863 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
864 "output_name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
865 "uuid": "2bdd91bd-d2b9-4516-b638-c0545fc46f9d"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
866 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
867 ]
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
868 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
869 "16": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
870 "annotation": "",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
871 "content_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
872 "errors": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
873 "id": 16,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
874 "input_connections": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
875 "input_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
876 "id": 14,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
877 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
878 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
879 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
880 "inputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
881 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
882 "description": "runtime parameter for tool Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
883 "name": "input_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
884 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
885 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
886 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
887 "name": "Refinery test tool 1-1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
888 "outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
889 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
890 "name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
891 "type": "txt"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
892 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
893 ],
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
894 "position": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
895 "left": 2096.5,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
896 "top": 574
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
897 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
898 "post_job_actions": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
899 "RenameDatasetActionoutput_file": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
900 "action_arguments": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
901 "newname": "test_04"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
902 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
903 "action_type": "RenameDatasetAction",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
904 "output_name": "output_file"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
905 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
906 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
907 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/refinery-platform/refinery_test/refinery_test_1-1/0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
908 "tool_shed_repository": {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
909 "changeset_revision": "b87749d7a24c",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
910 "name": "refinery_test",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
911 "owner": "refinery-platform",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
912 "tool_shed": "testtoolshed.g2.bx.psu.edu"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
913 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
914 "tool_state": "{\"__page__\": null, \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"stdout\": \"\\\"false\\\"\", \"exit_code\": \"\\\"0\\\"\", \"p_fail\": \"\\\"0.0\\\"\", \"empty_outfile\": \"\\\"false\\\"\", \"stderr\": \"\\\"false\\\"\", \"sleep_time\": \"\\\"0\\\"\"}",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
915 "tool_version": "0.1",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
916 "type": "tool",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
917 "uuid": "cf9af5ab-4aab-4db2-953c-e507c9c3b04a",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
918 "workflow_outputs": [
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
919 {
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
920 "label": null,
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
921 "output_name": "output_file",
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
922 "uuid": "a36ae36f-67bb-41da-b288-574ab16acc58"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
923 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
924 ]
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
925 }
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
926 },
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
927 "uuid": "098ea63d-c314-4e77-b154-7711077f3d5d"
eb72179f594b Uploaded
scottx611x
parents:
diff changeset
928 }