Mercurial > repos > scottx611x > qualimap2_bamqc

changeset 32:90170eb47bd1 draft

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planemo upload for repository https://github.com/scottx611x/qualimap2 commit dc78b7c4b1780b316ca4aba2be247969ac1100ec-dirty
author scottx611x
date Thu, 26 Jul 2018 16:44:53 -0400
parents a77bae54b1c7
children 0ea51e29a0ce
files qualimap_bamqc.py
diffstat 1 files changed, 3 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/qualimap_bamqc.py	Thu Jul 26 16:43:38 2018 -0400
+++ b/qualimap_bamqc.py	Thu Jul 26 16:44:53 2018 -0400
@@ -1,6 +1,7 @@
 #!/usr/bin/env python
 from __future__ import print_function
 import argparse
+import os
 from subprocess import check_call, CalledProcessError
 import shutil
 import sys
@@ -33,6 +34,8 @@
 
     args = parser.parse_args()
 
+    print(os.listdir(OUTPUT_DIR))
+
     qualimap_bamqc(
         args.input_file,
         args.out_genome_file,