# HG changeset patch
# User scottx611x
# Date 1532638677 14400
# Node ID 0e6aeed62025ab5f3e9940b9b04233b331cf89e6
# Parent  a3e9c80894ddbd914697d322d5e77a918f429a61
planemo upload for repository https://github.com/scottx611x/qualimap2 commit dc78b7c4b1780b316ca4aba2be247969ac1100ec-dirty

diff -r a3e9c80894dd -r 0e6aeed62025 qualimap_bamqc.py
--- a/qualimap_bamqc.py	Thu Jul 26 16:55:10 2018 -0400
+++ b/qualimap_bamqc.py	Thu Jul 26 16:57:57 2018 -0400
@@ -42,6 +42,7 @@
         args.java_mem_size
     )
 
+    print(os.listdir(os.getcwd()))
     print(os.listdir(args.out_dir))
 
     shutil.move(args.out_dir + "/genome_results.txt", "./genome_results.txt")
@@ -52,6 +53,8 @@
         args.out_dir + '/raw_data_qualimapReport'
     )
 
+    print(os.listdir(os.getcwd()))
+    print(os.listdir(args.out_dir))
 
 if __name__ == "__main__":
     main()