Mercurial > repos > scottx611x > qualimap2_bamqc

diff qualimap_bamqc.py @ 31:a77bae54b1c7 draft

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planemo upload for repository https://github.com/scottx611x/qualimap2 commit dc78b7c4b1780b316ca4aba2be247969ac1100ec-dirty
author scottx611x
date Thu, 26 Jul 2018 16:43:38 -0400
parents 418ee04dd1b2
children 90170eb47bd1
line wrap: on
line diff
--- a/qualimap_bamqc.py	Thu Jul 26 16:40:19 2018 -0400
+++ b/qualimap_bamqc.py	Thu Jul 26 16:43:38 2018 -0400
@@ -39,10 +39,10 @@
         args.java_mem_size
     )
 
-    shutil.move(OUTPUT_DIR + "/genome_results.txt", "genome_results.txt")
-    shutil.move(OUTPUT_DIR + "/qualimapReport.html", "qualimapReport.html")
+    shutil.move(OUTPUT_DIR + "/genome_results.txt", "./genome_results.txt")
+    shutil.move(OUTPUT_DIR + "/qualimapReport.html", "./qualimapReport.html")
     shutil.make_archive(
-        'raw_data_qualimapReport',
+        './raw_data_qualimapReport',
         'zip',
         OUTPUT_DIR + '/raw_data_qualimapReport'
     )