Mercurial > repos > scottx611x > qualimap2_bamqc

diff qualimap_bamqc.py @ 35:a3e9c80894dd draft

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planemo upload for repository https://github.com/scottx611x/qualimap2 commit dc78b7c4b1780b316ca4aba2be247969ac1100ec-dirty
author scottx611x
date Thu, 26 Jul 2018 16:55:10 -0400
parents 7e359370b5a2
children 0e6aeed62025
line wrap: on
line diff
--- a/qualimap_bamqc.py	Thu Jul 26 16:52:28 2018 -0400
+++ b/qualimap_bamqc.py	Thu Jul 26 16:55:10 2018 -0400
@@ -35,8 +35,6 @@
 
     args = parser.parse_args()
 
-    print(os.listdir(args.out_dir))
-
     qualimap_bamqc(
         args.input_file,
         args.out_genome_file,
@@ -44,6 +42,8 @@
         args.java_mem_size
     )
 
+    print(os.listdir(args.out_dir))
+
     shutil.move(args.out_dir + "/genome_results.txt", "./genome_results.txt")
     shutil.move(args.out_dir + "/qualimapReport.html", "./qualimapReport.html")
     shutil.make_archive(