Mercurial > repos > scottx611x > qualimap2_bamqc
comparison qualimap_bamqc.py @ 40:98944e914637 draft
planemo upload for repository https://github.com/scottx611x/qualimap2 commit dc78b7c4b1780b316ca4aba2be247969ac1100ec-dirty
author | scottx611x |
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date | Fri, 27 Jul 2018 11:45:23 -0400 |
parents | 2284e9b4c6b2 |
children | e856fda6f375 |
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39:2284e9b4c6b2 | 40:98944e914637 |
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47 'raw_data_qualimapReport', | 47 'raw_data_qualimapReport', |
48 'zip', | 48 'zip', |
49 args.out_dir + '/raw_data_qualimapReport' | 49 args.out_dir + '/raw_data_qualimapReport' |
50 ) | 50 ) |
51 | 51 |
52 shutil.move("raw_data_qualimapReport.zip", os.path.join(output_dir, file_name) | 52 shutil.move( |
53 "raw_data_qualimapReport.zip", | |
54 os.path.join(output_dir, "raw_data_qualimapReport.zip") | |
55 ) | |
53 | 56 |
54 [ | 57 [ |
55 shutil.move(os.path.join(args.out_dir, file_name), os.path.join(output_dir, file_name)) | 58 shutil.move( |
56 for file_name in [ | 59 os.path.join(args.out_dir, file_name), |
57 "genome_results.txt", | 60 os.path.join(output_dir, file_name) |
58 "qualimapReport.html" | 61 ) |
59 ] | 62 for file_name in ["genome_results.txt", "qualimapReport.html"] |
60 ] | 63 ] |
61 | 64 |
62 if __name__ == "__main__": | 65 if __name__ == "__main__": |
63 main() | 66 main() |