comparison qualimap_bamqc.py @ 29:71af3fbe85be draft

planemo upload for repository https://github.com/scottx611x/qualimap2 commit dc78b7c4b1780b316ca4aba2be247969ac1100ec-dirty
author scottx611x
date Thu, 26 Jul 2018 16:21:44 -0400
parents 8baa78250b7f
children 418ee04dd1b2
comparison
equal deleted inserted replaced
28:8baa78250b7f 29:71af3fbe85be
36 args.input_file, 36 args.input_file,
37 args.out_genome_file, 37 args.out_genome_file,
38 args.java_mem_size 38 args.java_mem_size
39 ) 39 )
40 40
41 print(os.listdir(os.getcwd())) 41 print(os.listdir("../"))
42 42
43 shutil.make_archive( 43 shutil.make_archive(
44 'raw_data_qualimapReport', 44 'raw_data_qualimapReport',
45 'zip', 45 'zip',
46 os.path.join(os.getcwd(), 'raw_data_qualimapReport') 46 os.path.join("../", 'raw_data_qualimapReport')
47 ) 47 )
48 48
49 49
50 if __name__ == "__main__": 50 if __name__ == "__main__":
51 main() 51 main()