diff tool_dependencies.xml @ 31:b35821db18e8 draft

planemo upload commit 9e980862c8b763cf3dd0209be49f0d2d75a90614-dirty

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Nov 21 16:41:52 2016 -0500
@@ -0,0 +1,27 @@
+<?xml version="1.0"?>
+<tool_dependency>
+	<package name="setuptools" version="19.0">
+        <repository changeset_revision="c0a6821af233" name="package_setuptools_19_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package> 
+	<package name="cooler" version="0.5.3">
+        <install version="1.0">
+            <actions>
+            	<action md5="f95024c8c201df01fbaa2de10d81edd3" type="download_by_url">https://pypi.python.org/packages/64/6e/8ed3ba753e269e0cb393ce8898292e4540a763f155bf6cf855b454dbbd2a/cooler-0.5.3.tar.gz</action>
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="c0a6821af233" name="package_setuptools_19_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="setuptools" version="19.0" />
+                    </repository>
+                </action>
+                <action type="make_directory">$INSTALL_DIR/lib/python</action>
+                <action type="shell_command">
+                    export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
+                    python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
+                </action>
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
+                </action>
+		    </actions>
+        </install>
+	</package>
+</tool_dependency>