Mercurial > repos > scottx611x > cooler_convert

diff recursive_agg_onefile.py @ 21:202ef48959d3 draft

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planemo upload commit 9e980862c8b763cf3dd0209be49f0d2d75a90614-dirty
author scottx611x
date Mon, 21 Nov 2016 13:06:33 -0500
parents 797818b4e2f6
children 90005893d112
line wrap: on
line diff
--- a/recursive_agg_onefile.py	Mon Nov 21 13:00:20 2016 -0500
+++ b/recursive_agg_onefile.py	Mon Nov 21 13:06:33 2016 -0500
@@ -27,7 +27,7 @@
 
     print(
         "Copying base matrix to level {0} and producing {0} zoom levels starting from 0...".format(n_zooms),
-        file=sys.stderr
+        file=sys.stdout
     )
 
     # transfer base matrix
@@ -35,7 +35,7 @@
          h5py.File(infile, 'r') as src:
         zoomLevel = str(n_zooms)
         src.copy('/', dest, zoomLevel)
-        print(zoomLevel, file=sys.stderr)
+        print(zoomLevel, file=sys.stdout)
 
 
     # produce aggregations
@@ -72,7 +72,7 @@
             h5opts = dict(compression='gzip', compression_opts=6)
             grp['bins'].create_dataset('weight', data=bias, **h5opts)
 
-            print(zoomLevel, file=sys.stderr)
+            print(zoomLevel, file=sys.stdout)
 
             c = cooler.Cooler(grp)
             binsize = new_binsize