# HG changeset patch # User sblanck # Date 1530000865 14400 # Node ID 07ac07715f2207f1a932a706c283159d959ef878 # Parent c08b824e40cc56062532f850462c8ad32bf4a28c planemo upload for repository https://github.com/sblanck/smagexp/tree/master/smagexp_tools commit 7026b0fbe3611962c37c7f9b5f001434f059e32c diff -r c08b824e40cc -r 07ac07715f22 MetaRNASeq.R --- a/MetaRNASeq.R Mon Jun 25 05:25:40 2018 -0400 +++ b/MetaRNASeq.R Tue Jun 26 04:14:25 2018 -0400 @@ -38,12 +38,6 @@ listfilenames <- trimws( unlist( strsplit(trimws(opt$inputName), ";") ) ) nbreplicates <- as.numeric(trimws( unlist( strsplit(trimws(opt$nbreplicates), ";") ) )) -listfiles -listfilenames -nbreplicates - - - #for (i in 1:length(listInput)) #{ # inputFileInfo <- unlist( strsplit( listInput[i], ';' ) ) @@ -58,9 +52,6 @@ html.files.path=opt$htmloutputpath result.template=opt$htmltemplate - -html.files.path - alpha=as.numeric(opt$fdr) listData=lapply(listfiles,read.table)