Mercurial > repos > sblanck > smagexp

diff MetaRNAseq.xml @ 35:a99bbda3cf1f draft

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planemo upload for repository https://github.com/sblanck/smagexp/tree/master/smagexp_tools commit e956e308e78c1c2d2c5ac7420621527f0d4dad28
author sblanck
date Thu, 21 Jun 2018 11:20:56 -0400
parents 0a74b8de4c10
children 22e1325aaa88
line wrap: on
line diff
--- a/MetaRNAseq.xml	Thu Jun 21 10:41:50 2018 -0400
+++ b/MetaRNAseq.xml	Thu Jun 21 11:20:56 2018 -0400
@@ -24,9 +24,18 @@
         Rscript 
         ${__tool_directory__}/MetaRNASeq.R 
             --input "#for $s in $studies: 
-                        ${s.input};${s.input.name};${s.nbreplicates}| 
-                    #end for
+                        ${s.input};
+                     #end for
 "
+            --inputName "#for $s in $studies: 
+                            ${s.input.name};
+                         #end for
+"
+            --nbreplicates "#for $s in $studies: 
+                            ${s.nbreplicates};
+                         #end for
+"
+
             --fdr $fdr
             --result $top_table
             --htmloutput $result_html