Mercurial > repos > sblanck > smagexp

diff MetaRNAseq.xml @ 9:328f4031e5d3 draft

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planemo upload commit f882a5ba78afeb368605beb3986936e86c485cbb-dirty
author sblanck
date Wed, 10 May 2017 08:12:48 -0400
parents 7f74250a083d
children e5a94bc69bd6
line wrap: on
line diff
--- a/MetaRNAseq.xml	Wed May 10 04:12:26 2017 -0400
+++ b/MetaRNAseq.xml	Wed May 10 08:12:48 2017 -0400
@@ -1,9 +1,16 @@
 <tool id="metarnaseq" name="RNA-seq data meta-analysis">
-	<description>perform meta-analysis thanks to metaRNAseq</description>
-	<!--requirements>
-	  <container type="docker">sblanck/smat</container>
-	  <requirement type="package" version="0.1.0">r-smagexp</requirement>
-	</requirements-->
+
+    <description>perform meta-analysis thanks to metaRNAseq</description>
+
+    <requirements>
+        <requirement type="package" version="0.1.0">r-smagexp</requirement>
+    </requirements>	
+
+    <stdio>
+        <exit_code range="1:" />
+        <regex match="Warning" source="both" level="warning"/>
+    </stdio>
+
 	<command interpreter="python">
 		<![CDATA[ 	
 		stderr_wrapper.py Rscript