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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 8f2b9b6c89892710bd5e0d8e35bcd8b645b0e44f
author saskia-hiltemann
date Tue, 07 Jun 2016 10:47:17 -0400
parents 48b3a755bd02
children
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#This is a sample file distributed with Galaxy that enables tools
#to use a directory of metagenomics files.  
#file has this format (white space characters are TAB characters):
#
# Reference Alignments:  http://www.mothur.org/wiki/Alignment_database
#
#<dbname>	<file_base>
#
#greengenes	/project/db/galaxy/mothur/core_set_aligned.imputed.fasta
#silva archaea	/project/db/galaxy/mothur/Silva.archaea/silva.archaea.fasta
#silva bacteria	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.fasta
#silva eukarya	/project/db/galaxy/mothur/silva.eukarya.fasta
#silva archaea nogap	/project/db/galaxy/mothur/Silva.archaea/nogap.archaea.fasta
#silva bacteria nogap	/project/db/galaxy/mothur/silva.bacteria/nogap.bacteria.fasta
#silva eukarya nogap	/project/db/galaxy/mothur/nogap.eukarya.fasta
#FungiLSU_train_1400bp_8506_mod.fasta	/project/db/galaxy/mothur/RDP/FungiLSU_train_1400bp_8506_mod.fasta
#trainset6_032010.rdp.fasta	/project/db/galaxy/mothur/RDP/trainset6_032010.rdp.fasta
#trainset7_112011.pds.fasta	/project/db/galaxy/mothur/RDP/trainset7_112011.pds.fasta
#trainset7_112011.rdp.fasta	/project/db/galaxy/mothur/RDP/trainset7_112011.rdp.fasta