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author saskia-hiltemann
date Mon, 16 Nov 2015 09:46:51 -0500
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iReport
=======

iReport Galaxy tool - HTML reporting in Galaxy

install to your Galaxy via the main tool shed: http://toolshed.g2.bx.psu.edu/

direct repository link:  http://saskia-hiltemann@toolshed.g2.bx.psu.edu/repos/saskia-hiltemann/ireport

email: s.hiltemann@erasmusmc.nl


Installation Instructions
--------------------------
This package uses (but does not install) Bash, Perl and Python. 

If Pandoc ((johnmacfarlane.net/pandoc/index.html)) is installed on your system PATH (command 'pandoc'), any MarkDown text items will be rendered using Pandoc (allows many markdown syntax extensions). 
If Pandoc is not present, a simple markdown conversion script is used (only handles vanilla syntax).


TODOs
---------------
- ~~option to download iReport webpage~~
- ~~markdown instead of plain text/html in text fields.~~
- Support for large tables
- Multiple columns in table converted to weblinks.
- Table colums link to archive files in history
- ..
- ..suggestions?