Mercurial > repos > sanbi-uwc > vcf_to_alignment
annotate tool-data/all_fasta.loc.sample @ 4:f58178c0f00d draft
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc commit 3e5c71977e50ec920d4f45be809d2528e55bff76
| author | sanbi-uwc |
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| date | Mon, 15 Oct 2018 00:34:44 -0400 |
| parents | 4b9ddf64558d |
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| rev | line source |
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4b9ddf64558d
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc commit c467fa511c437e11ea72b912975d64631b8d0f98
sanbi-uwc
parents:
diff
changeset
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1 #This file lists the locations and dbkeys of all the fasta files |
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4b9ddf64558d
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc commit c467fa511c437e11ea72b912975d64631b8d0f98
sanbi-uwc
parents:
diff
changeset
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2 #under the "genome" directory (a directory that contains a directory |
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4b9ddf64558d
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc commit c467fa511c437e11ea72b912975d64631b8d0f98
sanbi-uwc
parents:
diff
changeset
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3 #for each build). The script extract_fasta.py will generate the file |
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4b9ddf64558d
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc commit c467fa511c437e11ea72b912975d64631b8d0f98
sanbi-uwc
parents:
diff
changeset
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4 #all_fasta.loc. This file has the format (white space characters are |
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4b9ddf64558d
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc commit c467fa511c437e11ea72b912975d64631b8d0f98
sanbi-uwc
parents:
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changeset
|
5 #TAB characters): |
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4b9ddf64558d
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc commit c467fa511c437e11ea72b912975d64631b8d0f98
sanbi-uwc
parents:
diff
changeset
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6 # |
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4b9ddf64558d
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc commit c467fa511c437e11ea72b912975d64631b8d0f98
sanbi-uwc
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diff
changeset
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7 #<unique_build_id> <dbkey> <display_name> <file_path> |