# HG changeset patch
# User sanbi-uwc
# Date 1534425220 14400
# Node ID 9c39be76e559dfa9c6fc5fdd16ac82a05acb252e
# Parent  ec601f9af09b0e53e970607390480fb561078cdd
planemo upload for repository https://github.com/COMBAT-TB/vcf_snps_utils commit a277f88f2a997acde30a91fc0ad52cf96b697e22

diff -r ec601f9af09b -r 9c39be76e559 intersect.xml
--- a/intersect.xml	Thu Aug 16 08:51:43 2018 -0400
+++ b/intersect.xml	Thu Aug 16 09:13:40 2018 -0400
@@ -35,15 +35,15 @@
 
   <help>
 
-**What it does**
+  **What it does**
 
-Intersect SNPs and generate an output report from a CSV file of knowned SNPs (workflow generated/annotated)
+  Intersect SNPs and generate an output report from a CSV file of knowned SNPs (workflow generated/annotated)
 
-Usage: vcf_snps_utils intersect [OPTIONS] [VCFFILES]... CSVFILE
+  Usage: vcf_snps_utils intersect [OPTIONS] [VCFFILES]... CSVFILE
 
------
+  -----
 
-**Example**
+  **Example**
 
   VCF snp intersect tool (CSV file).
 
@@ -61,10 +61,10 @@
   <http://www.combattb.org/software/tools/> General help using CombatTB
   software: <http://www.combattb.org/gethelp/>
 
-Options:
-  --out TEXT  set the output directory, default is
+  Options:
+    --out TEXT  set the output directory, default is
               "/tmp/vcf_snps_utils_output/"
-  --help      Show this message and exit.
+    --help      Show this message and exit.
 
   vcf_snps_utils intersect example.vcf example.csv --out output/test
 
diff -r ec601f9af09b -r 9c39be76e559 vcf_snps_utils_macros.xml
--- a/vcf_snps_utils_macros.xml	Thu Aug 16 08:51:43 2018 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,9 +0,0 @@
-<macros>
-  <token name="@TOOL_VERSION@">0.0.2</token>
-  <xml name="requirements">
-    <requirements>
-      <requirement type="package" version="@TOOL_VERSION@">vcf_snps_utils</requirement>
-      <yield />
-    </requirements>    
-  </xml>
-</macros>
\ No newline at end of file