Mercurial > repos > sanbi-uwc > vcf2neo

diff write_db_summary.py @ 0:3e14eda348d3 draft default tip
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc commit 0245b4efed8ced6d06d76f1249a47d2178285385
author: sanbi-uwc
date: Mon, 19 Jun 2017 00:08:18 -0400
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/write_db_summary.py	Mon Jun 19 00:08:18 2017 -0400
@@ -0,0 +1,27 @@
+#!/usr/bin/env python
+from __future__ import print_function
+
+import argparse
+import os
+import os.path
+
+parser = argparse.ArgumentParser(
+    description="Write HTML summary from neostore datatype")
+parser.add_argument('basepath')
+parser.add_argument('label')
+
+args = parser.parse_args()
+
+output = """<html><head><title>Files for Composite Dataset ({})</title></head>
+    <p/>This composite dataset is composed of
+     the following files:<p/><ul>\n""".format(args.label)
+db_path = args.basepath + '/neo4jdb/databases/graph.db'
+for filename in os.listdir(db_path):
+    if filename.startswith('.'):
+        continue
+    path = db_path + '/' + filename
+    if os.path.isdir(path):
+        continue
+    output += "<li>{}</li>\n".format(filename)
+output += '</ul></html>\b'
+print(output)