Mercurial > repos > sanbi-uwc > trimmomatic

diff package_trimmomatic.sh @ 0:d8975856862e draft

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planemo upload for repository https://github.com/SANBI-SA/galaxy-tools/tree/master/tools/trimmomatic commit 59bf1dad1e71026bff0431a020335c51ce1fd153
author sanbi-uwc
date Fri, 20 Jan 2017 08:00:23 -0500
parents
children 642a39a927c9
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/package_trimmomatic.sh	Fri Jan 20 08:00:23 2017 -0500
@@ -0,0 +1,24 @@
+#!/bin/sh
+#
+# Package Trimmomatic tool files into tgz file for upload to
+# Galaxy toolshed
+#
+TGZ=trimmomatic.tgz
+if [ -f $TGZ ] ; then
+    echo $TGZ: already exists, please remove >&2
+    exit 1
+fi
+tar cvzf $TGZ \
+    README.rst \
+    trimmomatic.xml \
+    trimmomatic.sh \
+    tool_dependencies.xml \
+    test-data
+if [ -f $TGZ ] ; then
+    echo Created $TGZ
+else
+    echo Failed to created $TGZ >&2
+    exit 1
+fi
+##
+#